Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015822323.1_cds_XP_016501065.1_14836
CDS Infomation

[gene=LOC107819477] [db_xref=GeneID:107819477] [protein=two pore calcium channel protein 1B] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016501065.1] [location=join(3240..3374,4835..4978,5124..5231,8152..8247,9929..10053,11601..11661,11855..12021,12335..12440,12576..12653,13919..13980,22784..22856,23892..23957,24034..24177,25189..25246,27055..27162,28217..28280,30121..30289,30551..30615,30838..30928,33010..33096,34697..>34777)] [gbkey=CDS]
Sequence

ATGGAGGAATATCTACTGCCAGGAGAGAGTAGTAATTCGTGTCGGACTCGGAGGAGGAGT
GGTTCGATATTTGATCGCAGAGACGCTATTGCTCATGGATCAGCTTATCAAAAGGCTGCT
GCTTTGGTTGATCTTGCTGAAGACGGCATTGGTCTACCTGAGGAAATTCTTGAGGGGGCG
AGCTTTGAAAAAGCAGCAGAGTTGTACTTCATGTTTACTCGTTTTGACTTCCTCTGGTCA
CTTAATTATCTTGCACTAGTCGTTCTAAACTTTTTTGAGAAACCATTGTGGTGTTCCAAG
CATTTAGCTGAGTCTTGCAATAACAGAGACTACTACTATCTAGGAGAGCTGCCATTTTTG
ACTGGTGCCGAGTCCCTTATATTTGAGGGTGTCACTCTTCTGCTTCTTATAATACACATT
TTATTTCCAATATCATATGAAGGCTTCAATCTCTACTGGAGAAGTCTTCTCAACAGACTG
AAGGTCATTTTGCTGTTAATCTTGGTTGCAGATATTGTGGTCTACATTCTCTTTCTAGCA
GACTTCTATTATCTACCATTCCGTATTGCACCCTATCTTCGCGTGGTGTTCTTTATTTTG
AACATTAGGGAATTACGAGATAGCTTCTTCATCCTTGCAGGAATGCTTGGTACCTACCTT
AATGTTGTGGCTCTATCTGCTTTATTTCTTCTGTTCTCGAGCTGGTTAGCGTACGTCTTC
TTTGAAGACACACGGCAGGGGAAGACCACGTTTACTTCGTATGGCACCACGTTGTACCAA
ATGTTTGTTTTATTCACAACATCAAACAATCCAGATGTCTGGATTCCTGCGTACAAGGAC
TCACGTTGGTATTGCTTGTTTTTTGTTCTGTACGTGCTATTGGGCGTTTACTTTGTTACC
AACTTAATTCTTGCTGTTGTATATGATAGCTTCAAAAGTGAGCTTGTAAAACAAGTGGCT
GATAAAGATCGTTTGAGGCTAAGGACTTTGAAGAAAGCATTTAGCTTGATTGATGAAGCC
AACAATGGGCTCCTCAACGAGAAGCAATGTACCCTGCTGTTTGAGGAACTTAATAAATAT
AGGACATTGCCGAAAATATCAGGAGATGATTTTAAGTCAATATTCAATGAGCTGGATGAT
ACTGGTGACTTTAAGATAAATTTGGAGGAATTTGCTGATCTGTGCTCTGCCATTGGACTA
AGATTTCAGAAGGAAGATTCGCTGCCAATCTTTGAAGCATGTCCAAATTTCTATCATTCA
CCAGCATCAGAGAAGTTGAGAGGCTTCATCCGCGGAGCTACATTTGAGTACATAATAGTG
TTCGTTCTCCTTGTCAATCTTGTTGCTGTTATTATTGAAACTACGCTTGATATACAAAAC
AACTCAGGTCAAACCTTTTGGCAGAAGGTGGAGTTCACCTTTGGCTGGCTGTATGTTATT
GAGATGGCACTAAAAGTGTACACTTACGGTTTTGAGAACTATTGGAGGGATGGTCAAAAT
CGATTTGATTTTATCGTCACTTGGGTCATTGTTATTGGAGAAACAACTACATTTGTAGCC
CCTGATGATCTAACTTTCTTGTCCAACGGAGAATGGATTCGCTATCTTCTTATCGCAAGA
ATGTTACGATTAATTAGACTCTTGATGCATGTTGAGCGCTATCGTGCTTTTGTTGCCACA
TTTTTGACCCTCATACCAAGTCTGATGCCATACTTGGGGACCATATTCTGCATCTTATGC
TTTTACTGCTCTCTTGGTTTACAGATCTTTGGGGGGATTGTCAACACTGGAAACCCCAAT
TTAGCCCAAACTGATCTTGCTGGTAATGACTATTTGCTTTTTAACTTCAATGACTATCCA
AATGGCATGGTCACACTTTTCAATATATTGGTGATGGGAAACTGGCAAGTGTGGATGCAG
AGCTACAAGGAACTAACGGGGACTTCCTGGACTTATGCCTACTTTGTCAGCTTCTATCTT
ATTTCAGTTTTGTGGCTGTTAAATTTGATTGTAGCATTTGTCTTGGAAGCTTTTCAAGCA
GAAATGGATCTGGAGGCATCAGCGAGATGTGTGGATGGTGATGACAAG

Peptide Sequence

PEP ID

XP_016501065.1
PEP Infomation

PREDICTED: two pore calcium channel protein 1B [Nicotiana tabacum]
Sequence

MEEYLLPGESSNSCRTRRRSGSIFDRRDAIAHGSAYQKAAALVDLAEDGIGLPEEILEGA
SFEKAAELYFMFTRFDFLWSLNYLALVVLNFFEKPLWCSKHLAESCNNRDYYYLGELPFL
TGAESLIFEGVTLLLLIIHILFPISYEGFNLYWRSLLNRLKVILLLILVADIVVYILFLA
DFYYLPFRIAPYLRVVFFILNIRELRDSFFILAGMLGTYLNVVALSALFLLFSSWLAYVF
FEDTRQGKTTFTSYGTTLYQMFVLFTTSNNPDVWIPAYKDSRWYCLFFVLYVLLGVYFVT
NLILAVVYDSFKSELVKQVADKDRLRLRTLKKAFSLIDEANNGLLNEKQCTLLFEELNKY
RTLPKISGDDFKSIFNELDDTGDFKINLEEFADLCSAIGLRFQKEDSLPIFEACPNFYHS
PASEKLRGFIRGATFEYIIVFVLLVNLVAVIIETTLDIQNNSGQTFWQKVEFTFGWLYVI
EMALKVYTYGFENYWRDGQNRFDFIVTWVIVIGETTTFVAPDDLTFLSNGEWIRYLLIAR
MLRLIRLLMHVERYRAFVATFLTLIPSLMPYLGTIFCILCFYCSLGLQIFGGIVNTGNPN
LAQTDLAGNDYLLFNFNDYPNGMVTLFNILVMGNWQVWMQSYKELTGTSWTYAYFVSFYL
ISVLWLLNLIVAFVLEAFQAEMDLEASARCVDGDDKEAKRERRRNVGTKTRSQRVDFLLH
HMLRSELTECSNDNP

Transcript Sequence

Gene sequence data has not been registered.